Susztaklab Kidney Biobank

Our site hosts comprehensive kidney omics data to help understand kidney homeostasis and disease.

Welcome to the Susztaklab Kidney Biobank

The site is free to use, please cite our publications based on the user agreement.

eGFR GWAS (1.5 million) and Prioritization Liu et al Nature Genetics 2022	Human Kidney snATAC-seq Peaks (IGV) Sheng et al Nature Genetics 2021, N = 12,720 cells	Mouse Kidney scRNA-seq Atlas (UMAP) Control samples from:Park et al Science 2018; Dhillon and Park et al Cell Metabolism 2021 FA samples from:Dhillon and Park et al Cell Metabolism 2021
Human Kidney Expression QTL Atlases Qiu et al Nature Medicine 2018; Sheng et al Nature Genetics 2021; Liu et al Nature Genetics 2022	Human Kidney snATACseq (IGV) Liu et al Nature Genetics 2022, N = 57,229 cells	Developing Mouse Kidney scRNAseq (UMAP) Miao and Balzer et al Nature Communications 2021
Human Kidney Methylation QTL Atlas Liu et al Nature Genetics 2022	Human Kidney Disease snATACseq (IGV) Yan et al.	Developing Mouse Kidney snATACseq (IGV) Miao and Balzer et al Nature Communications 2021
Human Blood (CRIC) Methylation QTL Atlas Sheng et al PNAS 2019	Human kidney Integrative Atlas (snRNA, scRNA, snATAC and spRNA) Abedini et al 2023	scRNAseq of Mouse Acute Kidney Injury (IRI) Balzer et al Nature Communications 2022
Human kidney Bulk Gene Expression and Disease (eGFR, fibrosis) Correlation Beckerman et al eBiomedicine 2015	Susztaklab PennMedicine website	scRNAseq of Mouse Kidney Fibrosis (UUO) Doke et al Nature Immunology 2022
TRIDENT Transformative Research in Diabetic Nephropathy		snRNAseq and snATACseq of Rat Model of HTN and Fibrosis (DOCA Rats) Abedini et al Journal of Clinical Investigation 2023
		snATACseq of Rat Model of HTN and Fibrosis (DOCA Rats) (IGV) Abedini et al Journal of Clinical Investigation 2023
		Mouse kidney Bulk Gene Expression and disease correlation Hu et al pending
		Rat Diabetic Kidney Disease snRNA-seq (UMAP) Balzer et al Cell Reports Medicine 2023
		Mouse Kidney scRNA-seq Atlas Zhou et al Journal of the American Society of Nephrology 2023

Publications on PubMed

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